Oxford Nanopore Technologies on cord

Oxford Nanopore Technologies

Bioinformatics Software Test Engineer

External position
Oxford, UK
Hiring internally for Oxford Nanopore Technologies?
BioTech · MedTech
Our goal is to enable the analysis of anything, by anyone, anywhere.
Posted
5 days ago
Checked
cord regularly checks that external positions are still open
2 days ago

Skills & Experience

Job roles: Developer in Test
Experience level: Entry
Core skills considered: Agile, Automated Testing, Manual Testing, Software Documentation
Other skills considered: Scrum, Jira, Python, Data Analysis

Logistics

Base salary: Undisclosed
Some companies on cord are unable to disclose salaries publicly due to internal company policies. Message the company for salary information.
Employment type: Permanent
Remote working: Hybrid
Visa sponsorship: Not available

Job Description

We're looking for a diligent individual to join our team as a Bioinformatics Software Test Engineer, specialising in biopharma and clinical analysis workflows. This is an entry-level role, and training will be provided.

The role involves testing EPI2ME software products, developed by the EPI2ME software developers, to ensure that workflows are running as expected, that new features have been implemented correctly, and to identify any potential software-critical bugs before release. Key EPI2ME workflows adhere to SaMD regulatory standards (IEC 62304, ISO 13485 and ISO 14971). Software testing should be documented appropriately ensuring audit-readiness and compliance.

In this role, you will perform extensive testing, both manual and automated testing pipelines, on EPI2ME workflow products. All testing and verification activities will need to be documented appropriately to ensure audit-readiness and compliance. The role requires this individual to ensure that all workflow software products adhere to regulatory standards for software as a medical device (SaMD; IEC 62304, ISO 13485 ISO 14971). This includes supporting writing, maintaining and supporting verification testing activities, including writing software testing plans and execution of testing plans. The role requires the individual to be able to derive meaningful insights from biological data, and to have a requisite knowledge base encompassing key targets in the biopharma sector and in clinical spheres, as appropriate. The individual is encouraged to work closely with workflow developers in the team. They will continually test and validate EPI2ME workflows using powerful tools to build validation and verification reports. They will ensure the use of an appropriate structured framework to document the outcomes of the evaluation process, which will then be used by developers to improve and refine workflow software. The individual will also support cross-functional risk-management activities across the SaMD lifecycle.


Responsibilities


Duties

  • Main project focus: BioPharma and Clinical software workflows
  • Support all testing and verification activities of EPI2ME workflows, including writing and executing software testing plans, based on software requirements.
  • Ensuring all testing activities are recorded appropriately
  • Ensure all SaMD products adhere to regulatory guidelines for medical devices, including ISO 13485, ISO 14971 and IEC 62304.
  • Collaborate effectively with Customer Workflows, Applied Development and Quality Assurance teams to support compliant workflow development and audit readiness
  • Supporting teams to write verification documentation for project Design History Files (DHFs)
  • Ensure traceability matrices are maintained between software requirements, software units and items and software testing, and software architecture.
  • Utilise a variety of regulatory compliance software including MasterControl, JAMA, Jira, Monday.com.
  • Carry out validation and verification and generate metrics to monitor the performance of EPI2ME workflows and associated tools, including sensitivity and specificity calculations
  • Maintain knowledge of external advances in the field of long-read data analysis
  • Maintain knowledge of relevant bioinformatics tools and software

What You'll Bring…


Essential

  • MSc (or equivalent experience), in Bioinformatics, Computer Science, or a closely related discipline, or in a biology-related subject with substantial experience of Bioinformatics and/or data analysis
  • Good communication and interpersonal skills for discussing and presenting ideas within the team and with other colleagues
  • Willingness to adapt, listen and learn new skills.

Desirable

  • Practical experience working with SaMD products
  • Practical knowledge of ISO accreditation, regulatory compliance of Medical Device Software (IEC-62304, ISO-13485), GAMP5 guidelines and SaMD.
  • Experience writing documentation adhering to ISO/ IEC / GAMP5 guidelines.
  • Experience demonstrating independent working in a time-critical environment
  • Practical experience with the processing and analysis of large genomic datasets, and their associated metadata
  • Practical experience handling sequencing data with exposure to the commonly used software tools (samtools, bcftools) algorithms (alignment, assembly) and file formats (FASTQ, BAM, VCF)
  • Familiarity with long-read sequencing data analysis
  • Expertise in Biopharma / clinical bioinformatics workflows
  • Strong analytical skills with the ability to collect, organise, analyse, and disseminate significant amounts of information with attention to detail and accuracy
  • Knowledge of general programming concepts with the ability to comprehend popular programming languages
  • Knowledge of the nuances of the application of bioinformatics workflows in a clinical diagnostic environment
  • Ability to learn independently to use new software tools and systems
  • Versatility and the ability to work on multiple project facets simultaneously

Company Benefits

We offer outstanding benefits to include an attractive bonus, generous pension contributions, private healthcare and an excellent starting salary. Based within beautiful, landscaped surroundings with tree-lined walks, water features and a lake, all of which make for a wonderful working environment.
Bioinformatics Software Test Engineer at Oxford Nanopore Technologies
Position posted 5 days ago

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Starling Bank on cord

Starling Bank

Full Stack Engineer (ML Ops)

London, UK
FinTech · Banking · Finance
A better bank for everyone
Active
over 6 months ago
Responds to
0% of requests
Responds in
1h 55m
Requests
7 pending

Skills & Experience

Job roles: Full Stack
Experience level: Mid, Senior
Core skills considered: Java, React, Redux, AWS, JavaScript

Logistics

Base salary: £70K - £110K
Employment type: Permanent
Remote working: Hybrid (up to 2 remote days p/w)
Visa sponsorship: Not available

Job Description

Starling is the UK’s first and leading digital bank on a mission to fix banking! Our vision is fast technology, fair service, and honest values. All at the tap of a phone, all the time.

Starling is the UK’s first and leading digital bank on a mission to fix banking! We built a new kind of bank because we knew technology had the power to help people save, spend and manage their money in a new and transformative way.

We’re a fully licensed UK bank with the culture and spirit of a fast-moving, disruptive tech company. We’re a bank, but better: fairer, easier to use and designed to demystify money for everyone. We employ more than 3,000 people across our London, Southampton, Cardiff and Manchester offices.

Our technologists are at the very heart of Starling and enjoy working in a fast-paced environment that is all about building things, creating new stuff, and disruptive technology that keeps us on the cutting edge of fintech. We operate a flat structure to empower you to make decisions regardless of what your primary responsibilities may be, innovation and collaboration will be at the core of everything you do. Help is never far away in our open culture, you will find support in your team and from across the business, we are in this together!

The way to thrive and shine within Starling is to be a self-driven individual and be able to take full ownership of everything around you: From building things, designing, discovering, to sharing knowledge with your colleagues and making sure all processes are efficient and productive to deliver the best possible results for our customers. Our purpose is underpinned by five Starling values: Listen, Keep It Simple, Do The Right Thing, Own It, and Aim For Greatness.

Hybrid Working

We have a Hybrid approach to working here at Starling - our preference is that you're located within a commutable distance of one of our offices so that we're able to interact and collaborate in person. We don't like to mandate how much you visit the office and work from home, that's to be agreed upon between you and your manager.

Our Data Environment

Our Data teams are excited about the value of data within the business, powers our product decisions to improve things for our customers and enhance effective and agile decision making, regardless of what their primary tech stack may be. Hear from the team in our latest blogs or our case studies with Women in Tech.

We are looking for talented data professionals at all levels to join the team. We value people being engaged and caring about customers, caring about the code they write and the contribution they make to Starling. People with a broad ability to apply themselves to a multitude of problems and challenges, who can work across teams do great things here at Starling, to continue changing banking for good.

Requirements

We have built our entire banking platform in house and mostly in Java. We are looking for people who want to work on building the tooling that is used by our engineers on a daily basis.

We are looking for people who are truly full stack, and are as comfortable polishing their javascript front end as they are debugging the innards of their java applications database interactions, or standing up infrastructure with terraform. We are looking for people who can:

  • Design REST apis.
  • Code backend services, ideally using Java, or another other server side compiled language.
  • Develop modern front ends, ideally using React and Redux.
  • Get their code into the cloud and support it there, ideally on AWS.
  • Believe in clean coding, simple solutions, automated testing and continuous deployment.
  • Like to take ownership of a feature from the original idea through to live.
  • Think (like us) that a small number of empowered developers is the right way to deliver software.

Company Benefits

  • 33 days holiday (including flexible bank holidays)
  • An extra day’s holiday for your birthday
  • 16 hours paid volunteering time a year
  • Part-time and/or flexible hours available for most roles
  • Salary sacrifice, company enhanced pension scheme
  • Life insurance at 4x your salary
  • Hybrid/remote working
  • Private Medical Insurance with VitalityHealth including mental health support and cancer care. Partner benefits include discounts with Waitrose, Mr&Mrs Smith and Peloton
  • Generous family-friendly policies
  • Varied social groups set up and run by our employees
  • Perkbox membership giving access to retail discounts, a wellness platform for physical and mental health, and weekly free and boosted perks
  • Access to initiatives like Cycle to Work, Salary Sacrificed Gym partnerships and Electric Vehicle (EV) leasing

Full details are available on our careers site

Interview Process

Interviewing is a two way process and we want you to have the time and opportunity to get to know us, as much as we are getting to know you! Our interviews are conversational and we want to get the best from you, so come with questions and be curious. In general you can expect the below, following a chat with one of our Talent Team:

  • Stage 1 - 30 mins with one of the team
  • Stage 2 - Take home challenge
  • Stage 3 - 90 mins technical interview with two team members
  • Stage 3 - 45 min final with an executive and a member of the people team
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